Science Spotlight

For more than a century, CDFW’s Trout Hatchery and Stocking Program has been providing recreational fishing opportunities to anglers throughout California. Today, the trout hatchery program is composed of 13 hatcheries, which oversee 20 distinct fish production programs to produce 17 strains, species and subspecies of trout.

McCloud River Redband Trout (Oncorhynchus mykiss stonei) is the latest addition to the CDFW’s production and release efforts. McCloud River Redband Trout is a unique sub-species of rainbow trout endemic to the upper McCloud River area of Shasta and Siskiyou counties of northern California. This fish has beautiful coloration and unique adult characteristics – a pronounced crimson lateral stripe, adult parr marks, relatively large black dorsal spotting, yellow-white hues on the underbelly and white-tipped fins.

The new production and stocking program for McCloud River Redband Trout at Mt. Shasta Fish Hatchery will focus on the upper McCloud River, including McCloud Reservoir. Given that stocking will occur solely within the historic watershed of McCloud River Redband Trout, the program is distinguished by CDFW as a Heritage Trout Production Program. A Heritage Trout is defined as a species of trout native to California, in its native habitat and area. This type of fishery represents the most natural form of aquatic habitat, species and angling opportunity available. Many anglers seeking additional challenges and goals will specifically pursue heritage trout fisheries.

While modern genetics management and conservation hatchery methods are utilized in the McCloud River Redband program, the hatchery-produced fish are primarily for recreational angling and not for release to areas containing wild and genetically pure McCloud River Redband Trout in their natural habitat. This ensures that the most wild populations remain in their native habitat and can continue local adaptation without hatchery influence. CDFW expects the McCloud River Redband Trout program to reach full implementation by 2019-20. The McCloud River Redband program demonstrates CDFW’s progress and commitment to conservation efforts and fisheries management.

CDFW trout hatcheries will continue to produce and stock several strains and species of trout statewide to promote trout angling opportunities, and contribute to the conservation of California’s native species and sub-species of trout. One of the next priorities for the department’s trout hatchery program will commence in 2018, and focus on advancing the Kern River Rainbow Trout program at CDFWs’ Kern River Planting Base.

CDFW Fish and Wildlife Technician Beau Jones stocking McCloud River Redband Trout in August 2017. CDFW photos by hatchery staff.

CDFW’s Yolo Bypass Wildlife Area serves two critical – but sometimes competing – needs.

The 16,670 acres of riparian and agricultural habitat in Yolo County provide a refuge and an all-you-can-eat buffet for migratory waterfowl and resident wildlife to the west of Sacramento and the increasingly urbanized surrounding communities.

The wildlife area is also a key cog in the Sacramento region’s flood control system. In wet years, the vast flood plain accommodates massive water diversions from the nearby Sacramento, Feather and Yuba river systems to prevent flooding in populated areas and to relieve pressure on strained river levees.

With the drought-busting rains and snow received last winter, the wildlife area resembled an inland ocean for the thousands of daily commuters traveling the Interstate-80 Yolo Causeway, which crosses the northern edge of the wildlife area. The floodwaters stretched as far as the eye could see, reaching depths of 20 feet in some places, and submerging almost every natural feature underneath. The consequences were dire for wildlife unable to escape.

Pheasants, deer, raccoons, and small rodents of all kinds were among the victims. Some were overcome by the rising water, some starved while waiting out the floodwaters in trees or isolated patches of high ground, others were picked off by predators stalking the water line for fleeing prey.

As a result, efforts are now underway to help the area’s wildlife survive future flooding. The Yolo County Resource Conservation District has secured almost $700,000 in Proposition 1 state water project funds to build two wildlife escape habitat corridors and a demonstration garden over the next four years. The project includes partnerships with CDFW, Yolo Basin Foundation, Center for Land-Based Learning, Putah Creek Council, the United States Department of Agriculture’s Natural Resources Conservation Service and Point Blue Conservation Science.

The demonstration garden will serve as an educational component for visitors near the wildlife area’s entrance. Two other corridors in the southern end of the wildlife area will stretch more than 5 miles total and include 22 acres of native grass seeding for nesting and cover. The corridors will run parallel to the Putah Creek channel, which is the only existing natural escape route now on the refuge.

“These corridors are basically like wildlife roads,” said Jeffrey Stoddard, the Yolo Bypass Wildlife Area manager for CDFW.

The floodwaters advance slowly enough that even the smallest animals can escape, Stoddard explained, provided they head in the right direction and don’t get exposed to predators along the way.

“We have blocks of escape habitat now, but we will be creating connectivity, moving animals from the east side that is deeper to the west side that is higher ground,” he said.

The corridors will consist of a mix of flood-tolerant native shrubs, grasses and forbs that will provide escape routes to high ground, protection from predators, food, and good habitat year-round.

The corridor work began in June with Putah Creek Council student interns collecting wild rose, red stem dogwood and coyote brush clippings for propagating and use as plant stock for the wildlife corridors.

Photos courtesy of CDFW, the Putah Creek Council and the Yolo County Resource Conservation District. Students pictured are interns from the Putah Creek Council’s One Creek Restoration Internship program.

CDFW Seasonal Aid Katie Schroyer determines the age of a dove by examining its wing


A banded mourning dove at a CDFW trap site in northern California


Age and sex data are recorded before the bird is banded and released.


A large kennel trap can catch more than 30 birds at a time.

As the second half of California’s split dove season kicks off, dove hunters may put more than birds in their bags. They may harvest a bird with a band on its right leg – thus getting an opportunity to contribute important data that will help guide future management efforts.

Since 2003, California has been an active partner in a nationwide assessment of mourning dove populations. California is one of 39 states that currently participate in dove banding. During the months of July and August, trained biologists and volunteers trap and band doves throughout the state. The banding of migratory birds requires a Master Banding Permit issued upon approval of a study application by the U.S. Geological Survey. All banders must pass an annual training to participate and are then issued a sub-permit.

Mourning doves are so widely distributed that banding operations can be – and are – located almost anywhere, from rural locations to urban backyards. Larger operations located on Wildlife Areas, ranches and open desert sites may employ the use of a large kennel trap capable of trapping 30 or more birds at a time, while smaller operations (“backyard banders”) use small Kniffin traps that catch just one or two birds at a time.

When a bird is banded, age and sex data are recorded. This information, along with capture location, date, bander name and corresponding band number, becomes part of a massive database managed by the USGS’s Bird Banding Laboratory. The mourning dove banding data is available to any interested party, but is mainly used by the U.S. Fish and Wildlife Service (PDF), university scientists and state agency scientists to analyze and estimate annual survival, harvest rates, recruitment and abundance.

The resulting analysis is used by wildlife managers in setting annual hunting regulations. For instance, in 2015, the USFWS increased the take of mourning doves in the Western Management Unit (which includes the states of California, Oregon, Washington, Idaho, Nevada, Utah and Arizona) from a daily bag limit of 10 to 15. The California Fish and Game Commission followed suit, also increasing the possession limit from two to three times the daily bag limit, in order to accommodate hunters on multi-day hunting trips.

If you harvest or find (encounter) a banded bird, CDFW asks that you report the number directly to the Bird Banding Laboratory. This can be done online at www.reportband.gov, or by calling (800)327-2263. When reporting an encounter you will be asked for the band number and basic information about where and how you obtained the band.

The person reporting is allowed to keep the band, and will receive a certificate with the details about where, when and by whom the bird was banded.

The USGS Bird Banding Lab is the keeper of banding data for both the US and Mexico. As of September 18, 2017 and since 1960, the BBL has received over 64 million banding records. Since the inception of the North American Bird Banding Program, the BBL has received over 4 million encounter records. On average, over the past decade, the BBL received 1.2 million banding and 87,000 encounter records per year.

For more information about mourning dove banding, including the 2017 Mourning Dove Harvest Strategy, visit the Doves and Pigeons page on the FWS website.

CDFW photos by Kloey Helms
Featured photo: CDFW Seasonal Aid Katie Schroyer determines the age of a dove by examining its wing.

Beneath the waters off the California coast are vast forests that are home to an astounding variety of animals. Their sunlit canopies can soar 150 feet from the ocean’s floor. But instead of trees, these forests are made of kelp.

Worldwide, kelp is used in a host of everyday products like toothpaste, pudding, ice cream and even pharmaceuticals. Although kelp is valuable to humans, it is critical to sustaining life for many ocean-dwelling wildlife species ranging from microscopic plankton to sea otters, pelagic birds and predatory fishes. When a kelp forest is depleted, the entire underwater ecosystem can be thrown out of balance. This is why CDFW scientists are tracking and studying the amount of kelp growing in coastal waters.

In 1989, CDFW marine biologists began using aerial surveys to monitor the size of the kelp forests off of California’s coast. A second survey was conducted a decade later, and since 2002, CDFW has made an effort to conduct these surveys annually (although budget issues sometimes require skipping a year).

The surveys are conducted along the entire coastline and offshore of the Channel Islands. CDFW conducted the earliest surveys on its own, but now contracts out for this work. The contractor uses an aircraft with a specialized camera system that picks up the infrared image of the kelp. Those images become Geographic Information System (GIS) shapefiles that capture a snapshot of what the kelp canopy looks like on a given day. The images enable the viewer to see and compare the spatial area of a specific kelp forest over time.

A graph depicting CDFW’s historic aerial kelp survey data is located on the Kelp and Other Marine Algae webpage.

CDFW’s most recent (2016) kelp survey includes the following findings:

• The south coast mainland and the Channel Islands both experienced a reduction in kelp when compared to 2015 levels. The south coast mainland had almost half the canopy level surveyed the previous year.
• Along the central coast, kelp canopy levels were almost double that seen the previous year.
• North central canopy levels, while still low, were just over five times the 2015 survey levels.
• The north coast canopy levels were just over twice the 2015 measured canopy levels – but are still below the normal range for this area.

Rebecca Flores Miller, a marine environmental scientist with CDFW’s Marine Region office in Monterey, was the coordinator for the 2016 kelp survey.

“Kelp does fluctuate normally, anyway … there is a seasonality with it,” she explains. “However, during El Nino and warm water conditions as we’ve had in the recent past, the canopy doesn’t grow as well.”

Coastal development can also negatively affect the kelp canopy, as it sometimes leads to pollution, increased turbidity (which reduces the light needed for photosynthesis) and siltation (which can hinder growth or bury young kelp). An increase in urchin populations can also have a dramatic impact on kelp, and recently, a wasting disease decreased the numbers of sea stars (a predator of urchins) statewide.

“All of these things are connected within the ecosystem,” Flores Miller says.

Kelp survey data is available to anyone who is interested – members of the general public, other governmental agencies, universities and researchers.

The dataset has many uses, both within and outside of CDFW. It is used during the review process for commercial kelp bed lease requests. It has been a critical piece of the Marine Protected Area planning process. It has been used to help predict the abundance of many kelp forest-dependent species valued by humans, such as abalone. And it has helped scientists understand issues such as the recent abalone die-off in northern California.

CDFW Photos: giant kelp and bull kelp (by Rebecca Flores Miller), and image of kelp forest near Cambria taken during the 2016 aerial kelp survey.

The Pacific herring – much like squid and anchovy – is an important forage fish that supports a commercial fishery and provides a prey source for all manner of fish and wildlife, including whales, seals, sea lions, sturgeon, salmon, pelicans and numerous other species of birds and invertebrates.

The largest population of Pacific herring in California spawn in San Francisco Bay, and since 1972, CDFW has been responsible for monitoring and managing their numbers. CDFW uses annual vegetation dive surveys and spawn (herring eggs) surveys to calculate a population estimate each year. CDFW also uses commercial fishery and mid-water trawl survey information to look at the composition and general condition of the spawning population.

CDFW has just completed and posted online the 2016-17 San Francisco Bay Season Summary for the Pacific herring fishery. The good news is that the spawning population, estimated at 18,300 tons, is up slightly from the 2014-15 and 2015-16 seasons. But it is still far below the historical average of 49,400 tons. Less than ideal ocean conditions are cited for the below-average numbers.

CDFW closely regulates the commercial Pacific herring fishery in the San Francisco Bay, setting quotas, season dates and using the commercial catch data to help further analyze the size, age and condition of the spawning population. Typically about six inches long, the fish primarily are harvested for their roe, which is prized in Japan. CDFW maintains a blog on the species called the Pacific Herring Management News.