Science Spotlight

A healthy steelhead trout surveyed at Pescadero Creek Lagoon Complex in 2017


The aftermath of a winter sandbar breach 2014. These nearly annual breaches resulted in large die-offs for the lagoon’s steelhead.


A manual breach of Pescadero Creek Lagoon Complex. Managed breaches of the lagoon can prevent fish kills caused by turbulent natural breaches. Photo Courtesy of UC Davis School of Veterinary Medicine

There’s a dichotomy in the way Pescadero Creek Lagoon Complex in coastal San Mateo County has both supported—and been detrimental to—steelhead trout for much of the past 25 years.

On one hand, the lagoon complex—the largest tidal marsh between Elkhorn Slough and the San Francisco Bay estuary—boasts high growth rates for Central California Coast Steelhead. The lagoon system allows the species, which is federally listed as endangered, to reach a size that increases their likelihood of surviving at sea. Steelhead also use the system for juvenile rearing and resting during migration.

On the other hand, nearly every year since the mid-1990s, the lagoon faced harsh fall/winter sandbar breaches that filled the system with oxygen-depleted water and spread toxic sediment produced by the breakdown of organic matter like plant material in the absence of oxygen.

These breaches often resulted in large die-offs for the lagoon’s steelhead population. Historically, population estimates have reached as many as 17,000 steelhead rearing into the fall.

“It was a one-two punch where fish faced lack of oxygen and got hit with harsh toxic compounds. It was really unfortunate because the lagoon system works so well to grow steelhead, but we were losing the production every year,” said District Fisheries Biologist Jon Jankovitz.

Efforts to actively manage breaches began in 2012, but were stalled in 2014 and 2015 when the steelhead population was diminished due to drought conditions. In 2015, the California Department of Fish and Wildlife (CDFW) and the National Oceanic Atmospheric Administration (NOAA) partnered with the Department of Parks and Recreation (DPR), which owns much of the land associated with the complex, in adopting a monitoring and management plan.

In 2016, a significant fish kill caused by a turbulent sandbar breach prompted further action. CDFW, NOAA and DPR resumed active management to improve water conditions and prevent the deadly breaches.

The restoration team installed a sandbar dam at a major channel to slow the release of oxygen-depleted water and sediment into the system. Staff also preemptively manually breached the lagoon mouth on occasions when they anticipated a harmful natural breach.

Jankovitz conducts weekly water quality monitoring and twice-monthly dry-season fish sampling to inform management decisions. He produces an annual report on the health of the steelhead population and a summary of seasonal water quality transitions.

So how has active management faired? There hasn’t been a significant fish kill since 2016.

“We’ve saved the steelhead population for the last couple of years. We’re fortunate for the success we’ve had so far,” said Jankovitz.

Another mark of success has been the documented presence this year of sexually mature holdovers, meaning steelhead that were reared in the lagoon for two seasons even though they were large enough to smolt (i.e. migrate to sea).

“This obviously couldn’t happen if there was a fish kill the year prior. These holdovers represent a life history strategy that may fill in gaps during down reproductive years or periods of poor ocean conditions,” said Jankovitz.

There’s a long-term restoration plan in the works which would likely involve structural changes, such as relocating culverts and breaching levees, to alter the dynamics of how much tide flows in and out of the system. The plan includes a sediment removal project that was implemented in 2019 to increase fish passage.

Ultimately, CDFW and DPR would like to keep the system thriving without active management. “We don’t love breaching the lagoon manually because it can be stressful for fish and other aquatic species,” Jankovitz said.

Meanwhile, fostering an environment in Pescadero Creek Lagoon Complex that supports a large population of fast-growing steelhead continues to be top priority.

“Aside from being a native California species with a long history of recreational and angler use, steelhead are a great biological indicator of the health of streams and lagoon systems. The ecology of these systems would likely fall apart without them,” Jankovitz said.

Photos courtesy of CDFW District Fisheries Biologist Jon Jankovitz and the Bodega Marine Lab at University of California, Davis. Top Photo: District Fisheries Biologist Jon Jankovitz with a healthy Pescadero juvenile steelhead.

Media Contact:
Ken Paglia, CDFW Communications, (916) 322-8958

Faded black and white photos are all that’s left of the Owens River Gorge’s glory days as a trophy brown trout fishery. Biologists expect the fish to make a comeback following near-annual pulse flows that begin in September to improve habitat.




CDFW crews electrofish the Owens River Gorge two times per year to assess the health of the river’s brown trout.

From boom to bust to decades of angler indifference, few California fisheries have experienced such wild swings of fortune as Mono County’s Owens River Gorge.

The latest chapter in the long saga of the Gorge unfolds this month when the Los Angeles Department of Water and Power (LADWP) sends a relatively brief burst of water known as a “Channel Maintenance Flow” down the 10-mile stretch of river between the Upper Gorge Power Plant and Pleasant Valley Reservoir to benefit fish habitat.

From Sept. 9 to Sept. 17, water flows will rise from the relatively placid 35 to 55 cubic feet per second (cfs) typical in the Gorge to 680 cfs before gradually ramping back down. Access to the Gorge will be closed by LADWP during the nine-day “pulse flow” event for public safety.

The temporary boost in water flow represents the successful resolution of decades of legal battles involving LADWP, Mono County and CDFW. The high flows are expected to breathe new life into the Owens River Gorge ecosystem and its once-storied brown trout fishery. Court settlements mandate the pulse flows continue almost annually -- 18 out of every 20 years.

The flows are intended to replicate seasonal scouring that occurred naturally in the Gorge long before dams, power plants and water diversions were constructed in the last century. In fact, these alterations dried up the Owens River Gorge from 1953 to 1991 until years of litigation restored some minimal flows and attempts to restart a once-fabled brown trout fishery.

The Owens River Gorge is paradoxical – so close yet so far away. Just northwest of Bishop and within sight of Highway 395, it is difficult to access with limited and steep trails to reach its waters 500 to 900 feet below the rim. Since water returned to the Owens River Gorge in 1991, it has been more popular with hikers and rock climbers than trout anglers.

It was a much different story prior to the construction of the Long Valley Dam in 1941, which created Crowley Lake, and the subsequent addition of a number of power plants along the stretch of river. Before then, the Owens River Gorge was a destination brown trout fishery with a worldwide reputation. So good was the fishing it was one of the few waters in California with limits based on weight – 25 pounds plus one fish per angler per day.

CDFW Environmental Scientist Nick Buckmaster is based in Bishop and conducts twice-yearly electrofishing surveys in the Gorge along with macroinvertebrate sampling.
“Right now, the fish populations are pretty stunted,” Buckmaster said. “We just don’t have large brown trout in the Gorge anymore.”"

The Gorge is home almost exclusively to wild brown trout and the populations are high. Buckmaster estimates between 1,500 to 5,000 trout per mile, numbers that compare favorably to many blue-ribbon trout fisheries in the state.

“The problem is they are all small. Their growth really slows down around 5 inches, and most of the fish in the Gorge are less than 8-inches long. Their growth really plateaus,” he said. “By the time they get to 8 inches, they are geriatric fish.”

Buckmaster explained that brown trout undergo an important life change once they reach between 8 and 14 inches in size. They mostly stop eating aquatic insects and transition into apex predators, preying on other fish and just about anything else of substance they can eat. The diet change leads to rapid growth and turns them into a prize for any trout angler skilled enough to catch them.

Plateauing at 5 inches, however, most of the brown trout in the Owens River Gorge never reach that important developmental milestone or achieve it only toward the end of their lives.

“If you want big brown trout, they need something to eat,” Buckmaster said. “And they usually need a lot of something to eat.”

CDFW fisheries biologists expect the pulse flows to provide just that by dramatically altering the ecosystem. The big burst of water will scour pools and restore the deep-water holding and ambush habitat needed by large brown trout. The flows will flush out years of accumulated sediment, exposing gravel beds critical for trout breeding while fostering a broader diversity of aquatic life than what’s present in the Gorge today.

Mayflies and stoneflies are largely absent from the ecosystem, and caddisflies – safely encased and underneath rocks in their larval stages – provide a limited food source. Small populations of native Owens suckers exist in the Gorge. Their numbers are expected to grow with an increase in aquatic insect life following the pulse flows, incidentally providing important forage for growing brown trout.

The high waters will inundate and benefit riverside riparian growth, offering shade and cover and additional insect habitat. The flows also are expected to flush out invasive  New Zealand mud snails that have infested the Gorge over time. The snails provide little benefit to fish and are a source of competition for other macroinvertebrate life.

Buckmaster said biologists could see positive changes in the Gorge as quickly as three months after the flows. And bigger brown trout could start turning up in Buckmaster’s electrofishing surveys – and at the end of anglers’ lines – as early as next year.

CDFW Photos. Top Photo: CDFW scientific aids Christi Kruse and Emma Hewitt identify some of the macroinvertebrate life taken from the Owens River Gorge.

A long, wet winter has been good for Junction Reservoir and CDFW’s Kamloops rainbow trout that live there.


The June Lake Marina graciously offered up its net pens to CDFW’s Kamloops rainbow trout program when the drought forced CDFW to rescue its brood stock from a shrinking Junction Reservoir.


CDFW hatchery staffers Jimmy Sparks, left, and Drew Klingberg prepare to sex and sort Kamloops brood stock for later spawning, separating males from females as well as those females ready to spawn immediately versus those that need more time to ripen. The fish are returned to Junction Reservoir after spawning.


The offspring from these Kamloops will be raised at CDFW’s Fish Springs Trout Hatchery and stocked by airplane as fingerlings into backcountry waters across the state approved for trout stocking.


Resplendent in their spring spawning colors, Kamloops rainbow are raised and bred for their hard-fighting ability and wild nature that allows them to thrive in California’s remote backcountry waters and provide a thrill for anglers who catch them.

Junction Reservoir in Mono County is CDFW’s brood lake for the Kamloops rainbow trout, a hard-fighting strain originally from the Kamloops region of British Columbia.

The 20-acre lake sits on a private cattle ranch off-limits to fishing. It provides a secluded setting for the brood stock, whose progeny are used almost exclusively for the aerial stocking of backcountry waters throughout the state.

“We try to keep them raised in a more wild condition so they do better in the wild,” said Hot Creek Trout Hatchery Manager Mike Escallier. “They are a really fun fish to catch. They jump a lot. They will jump 3 feet out of the water when you hook one.”

And Junction Reservoir has never looked better. This spring, the lake was filled to the brim after a long, cold, wet winter. Near the mouth of the lake’s one small inlet, Kamloops were staging for a spawning run, their feisty nature on full display in the clear waters, breaking the surface occasionally and fighting each other over territory.

Kamloops further up the inlet were blocked from moving upstream by a concrete and metal trap. That’s where CDFW’s hatchery staff collect and sort the fish each spring, spawning them manually to produce the offspring that will be deposited as fingerlings this summer by airplane into backcountry waters approved for stocking.

The entire scene is a welcome sight after California’s drought nearly collapsed CDFW’s backcountry fish-stocking program. During the darkest days of the drought, the small inlet feeding into Junction Reservoir dried up. Combined with the years-long shortage of rain and snow, Junction Reservoir withered to about half its size. In 2013, CDFW conducted an emergency fish rescue to save about 2,000 of the brood fish and its backcountry trout stocking program altogether.

The rescued fish were relocated to CDFW trout hatcheries and other nearby waters for safe-keeping. The owners of the June Lake Marina provided a major assist, offering up some of their net pens on June Lake to CDFW and its Kamloops at no charge. The June Lake net pens continue to hold some Kamloops, which CDFW spawns each spring until the program transitions back fully to Junction Reservoir and CDFW’s Fish Springs Trout Hatchery south of Big Pine where the baby Kamloops are raised.

CDFW returned brood fish to Junction Reservoir in the spring of 2017 following a wet winter and heavy snowpack. CDFW is rebuilding production toward its annual goal of collecting and fertilizing 1.4 million eggs. Some of the offspring are put back into Junction Reservoir to add genetic diversity and different age classes to the rebuilding brood population as no natural spawning occurs in the lake.

One benchmark hatchery managers and biologists are striving toward is the return of Kamloops to Crowley Lake, where more anglers will have a chance to enjoy them.

Before the drought wreaked havoc on CDFW’s Kamloops program, a portion of the Kamloops produced each year were allocated to Crowley Lake. While the backcountry trout are sterile – or “triploid” – the fish stocked into Crowley are “diploids” capable of spawning naturally.

“They spawn at different times than other strains of rainbow trout,” explained Escallier. “They give anglers fishing the creeks opportunity. They tend to be running up the creeks from Crowley right around the trout opener.”

CDFW Photos. Top Photo: The inlet to Junction Reservoir is blocked by a fish trap where CDFW hatchery employees catch fish in the spring for spawning.

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Media Contact:
Peter Tira, CDFW Communications, (916) 322-8908

Lahontan cutthroat trout are a Crowley prize. In addition to natural spawning that occurs in the lake, CDFW plants the fish as fingerlings in the fall. By the spring opener, many like this fish are resplendent in their spawning colors.

Jim Erdman conducts creel surveys to see how many trout CDFW planted last fall turn up on opening day. Fish 15 inches or longer are determined to be from last fall's stocking when they were planted as fingerlings.

Mark Risco from Temecula shows off the 20-inch brown trout he caught opening day at Crowley Lake. In addition to natural spawning, CDFW's Hot Creek Hatchery stocks thousands of brown trout each year, which are very popular with Crowley anglers.

CDFW volunteer Carl Ronk conducted opening day creel surveys at Crowley Lake along with CDFW Environmental Scientist Jim Erdman.

Mono County’s Crowley Lake is a destination fishery that attracts trout anglers of all kinds – bait fishermen, lure casters, trollers and fly anglers – throughout the state during its open season.

The sprawling lake, situated at 6,700 feet and covering some 5,300 surface acres in the Eastern Sierra, also represents a huge investment for CDFW. The nearby Hot Creek Trout Hatchery raises hundreds of thousands of rainbow, brown and Lahontan cutthroat trout for Crowley each year that provide the backbone of the quality angling experience. Many of the fish are stocked as fingerlings in the late summer or fall and grow rapidly in the invertebrate-rich environment. Some go on to spawn in the lake’s many feeder creeks and supply wild progeny to the population.

All of which helps explain why CDFW Environmental Scientist Jim Erdman has been out conducting creel surveys at Crowley every opening day since joining CDFW in 2005. Based in Bishop, Erdman’s goal is to contact at least 300 anglers and see which hatchery fish are turning up in their catch, in what numbers, in what proportion of species, and in what condition. The report is an annual check to see whether CDFW’s management plan for Crowley remains on point or whether adjustments need to be considered. The opening day creel surveys have been taking place since 1997 when CDFW biologist Curtis Milliron wrote the Crowley Lake Management Plan.

CDFW volunteer Carl Ronk assisted Erdman this past opener April 27. The two split up at times – one checking anglers along the shoreline, the other awaiting returning boats to the Crowley Lake Fish Camp marina, the only formal boat launch at the lake.

Their tools for the day included a clipboard for note-taking and a 15-inch wooden “Crowley Stick” for measuring fish. CDFW biologists have determined that a fingerling trout stocked in the fall should be 15 inches or greater by opening day in the nutrient-rich waters. Erdman typically completes and submits his report by the afternoon of the opener and shares it with anyone interested. Local papers have been known to reprint it in its entirety.

For the 2019 Crowley opener, the creel survey found shoreline angler success was greatly improved from the previous year with an average catch per angler of 3.66 trout compared to last year’s average of just 0.71 trout. Overall, however, catch rates and total catch per angler were lower than 2018. Fish size was also down. Approximately 41.4 percent of the rainbow trout measured were greater than 15 inches, well below the annual average of around 70 percent. The catch rate fell below CDFW’s management goal of one fish per angler for each hour of effort.

A long, cold winter and late ice-out were cited as factors in a slower-than usual Crowley opener and smaller fish with less time to fatten up post ice-out.

“Crowley Lake did not ice-out until April 10, 2019, and this kept fish in deeper water than usual,” Erdman wrote. “No fish were seen in the McGee, Crooked or Whiskey Creek inlets and few to no fish were seen staging for a spawning run. Water temperatures in the inlets remained below 40 degrees.”

Rainbow trout made up the majority of the catch followed by brown trout. Lahontan cutthroats were scarce. CDFW annually stocks 100,000 Lahontan cutthroat fingerlings in the fall. Cutthroats represented just 0.9 percent of the shoreline catch and 1.6 percent of the boating catch compared to 2018 findings of 11.3 percent of the shoreline catch and 2.2 percent of the boating catch.

Opening day on Crowley Lake, with its big crowds and festive atmosphere, has always been about more than bag limits as reflected in Erdman’s creel survey report.

“Returning boat anglers were a bit slower than usual coming in off the lake probably due to the pleasant conditions on the lake. Relaxing in the sun and drifting in the slight breeze. A grand day to be on the water.”

CDFW Photos. Top Photo: CDFW's creel surveys play an important role in evaluating the lake's management and stocking allocations.

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Media Contact:
Peter Tira, CDFW Communications, (916) 322-8908
 

Lake-side signage lets anglers know Kirman has recently been stocked with wild brook trout and asks for help from anglers in competing a brief survey about their fishing experience.


CDFW fisheries biologists electrofish Silver Creek in Mono County to remove non-native brook trout to reduce competition with native cutthroats.


The tremendous amount of aquatic life within Kirman Lake provides a nearly unlimited food supply for transplanted brook trout from Silver Creek and transplanted Lahontan cutthroat trout from Heenan Lake. Kirman itself has no spawning habitat and is dependent on trout plants from CDFW to maintain the trophy trout fishery.


Before release into their new home in Kirman Lake this fall, brook trout were measured and their adipose fins clipped. CDFW scientists plan to track their growth rates with the help of voluntary angler surveys.

It’s a question that has been asked by more than a few eastern Sierra trout anglers: What happened to the fishing at Kirman Lake?

Kirman, a small backcountry lake north of Bridgeport in Mono County, has long been heralded as one of the very few places in the state where anglers could catch trophy brook trout.

While many high-elevation waters hold overpopulations of stunted brook trout measured in inches, the brook trout in Kirman were measured in pounds. Fish in the 2- to 4-pound class were common with numerous reports of brookies exceeding 5 pounds.

The lake requires a moderate, 3-mile hike to reach – just enough distance and difficulty to discourage casual anglers and help minimize some of the fishing pressure, particularly with so many great trout fishing options nearby. The lake is a special-regulations water with limited harvest. It is open to fishing during the state’s traditional trout season from the last Saturday in April to Nov. 15. Only artificial lures with barbless hooks may be used. Only two trout can be kept – with a minimum size limit of 16 inches.

Kirman was a destination known well beyond the confines of Mono County.

Fly fishing author and instructor Denny Rickards included Kirman in his book “Fly Fishing the West’s Best Trophy Lakes.”

Rickards writes, “Those who have made the trek and landed one of these beautiful trout know what a delicate lake it is. Part of the promise here is more than just big brook trout – the lake also harbors big cutthroat. However, the cuts aren’t the primary focus of those who fish here. It’s those big, beautiful brookies that bring fishermen up the trail.”

Author Bill Sunderland likewise highlighted Kirman in his book “Fly Fishing California Stillwaters.” He writes, “The fish here, both brook trout and Lahontan cutthroats from Heenan Lake, grow exceptionally fast. A four-year-old brookie can be twenty inches long and weigh four pounds. Many of them are football-shaped, the result of their rapid growth.”

In recent years, however, the brook trout seemingly disappeared with anglers reporting fewer catches with no brookies in the mix. Fishing reports from Kirman dried up as well at local tackle shops with fewer anglers apparently making the trek.

What happened to Kirman Lake and its trophy brook trout is no mystery to CDFW fisheries biologists, who are committed to restoring the lake to its former glory.

“There’s no spawning habitat,” explained Jeff Weaver, a senior environmental scientist with CDFW who oversees the department’s Heritage and Wild Trout Program. “All the fish in Kirman Lake have been stocked to provide the recreational fishery.”

Brook trout were planted annually by CDFW until 2015 when hatchery problems prevented the raising and delivering of the fish.

What Kirman lacks in spawning habitat it makes up for in food abundance. Unlike many high-mountain lakes where trout eke out an existence in near-sterile conditions, Kirman is the equivalent of a 24-hour, all-you-can-eat buffet. The lake is loaded with all manner of aquatic invertebrates -- water boatman, dragonflies, mayflies and midges – along with high-protein leeches and shrimp-like scuds. The heavy population of scuds accounts for the tremendous growth rate and size of Kirman brook trout.

When Russell Black, CDFW’s new fisheries supervisor for the Inland Deserts Region, learned about the lack of hatchery plants and the poor state of the once-great fishery, he came up with a simple yet creative solution.

This past fall, work was underway at nearby Silver Creek to prepare the water for the eventual restoration of native Lahontan cutthroat trout. CDFW biologists electrofished Silver Creek to remove the non-native brook trout there to minimize competition with the native cutthroats.

Black’s idea: Take those brook trout and transport them to Kirman.

More than 1,300 Silver Creek brook trout in a variety of sizes were relocated to Kirman. Prior to release, the fish were measured and their adipose fins clipped. CDFW biologists encourage anglers at Kirman this upcoming trout season to record their catch and fishing experiences at angler survey boxes lakeside so they can track the transplanted Silver Creek brook trout.

Given the exceptional growth rate at Kirman, CDFW biologists expect anglers to get into some quality fish by the fall.

Even as CDFW shifts its statewide trout hatchery focus to raising and stocking native trout as opposed to non-native brown trout, brook trout or even domesticated strains of hatchery rainbow trout, biologists see a future for trophy brook trout in Kirman and are exploring options to resume annual hatchery stocking.

“Kirman Lake is one of those celebrated fisheries where we weigh management in favor of continuing that recreational fishery,” said CDFW’s Weaver, who himself has fished Kirman a dozen or so times over the past 20 years. “Kirman Lake is managed as a trophy trout fishery and we intend to continue to manage it as a trophy trout fishery. We’ve just been on pause as a result of the lack of stocking.”

The pause may be over, though, as CDFW intends to maintain the supplemental stocking from Silver Creek until regular hatchery plants can resume.

CDFW Photos. Top Photo: This small brook trout was one of many relocated this fall from Silver Creek to Kirman Lake, where it could potentially grow into a trophy-sized fish awaiting anglers this trout season.

Media contact: Peter Tira, Communications, (916) 322-8908