Science Spotlight

The latest issue of California Fish and Game, 103-3, makes a significant contribution to the body of research related to longfin smelt in California. A paper titled, “Historic and contemporary distribution of Longfin Smelt (Spirinchus thaleichthys) along the California coast (PDF)” analyzes and presents observation data for this species from a variety of published and unpublished sources dating from 1889 to 2016. This anadromous fish, which is listed as threatened under the California Endangered Species Act, has been documented in a diverse range of habitats, including coastal lagoons, bays, estuaries, sloughs, tidal freshwater streams and nearshore habitats. In addition to providing a comprehensive look at the existing information available for longfin smelt along the California coast, this paper identifies additional information needed to improve management and enhance recovery of the species within the state.

In “Distribution and derivation of dabbling duck harvests in the Pacific Flyway (PDF),” the authors look at abundance, banding and harvest data from throughout the Pacific Flyway and other important source areas in the Central Flyway to estimate the distribution and derivation of Pacific Flyway dabbling duck harvests during 1966−2013. The Pacific Flyway has long been considered an important wintering area for dabbling ducks. Better knowledge of the origins of these birds could assist in both harvest and habitat management.

The authors of “Distribution of Amargosa River pupfish (Cyprinodon nevadensis amargosae) in Death Valley National Park, CA (PDF)” endured harsh environmental conditions to document the occurrence of Amargosa River pupfish along the lower Amargosa River drainage where the species has not been previously documented. The downstream-most location of Amargosa pupfish captured in this study extends the previously recorded geographic range approximately 49 river km. The findings not only determine the distribution of Amargosa River pupfish within Death Valley National Park, but will help identify suitable locations at which to establish long-term monitoring sites.

California Fish and Game has published high-quality, peer-reviewed science for the past 103 years, making important contributions to the understanding and conservation of California’s wildlife.

Cover photo courtesy of Gerald and Buff Corsi © California Academy of Sciences.

For residents of Humboldt and Del Norte counties, the majestic Roosevelt elk is a common sight. Although Roosevelt numbers were dwindling in California by the 1920s, conservative management strategies and limited hunting opportunities have helped them to rebound. Today, researchers have identified more than 20 distinct groups of elk in these two counties, many of which consist of well over 50 animals.

This conservation success story doesn’t come without a downside, though. Elk require large amounts of food to survive, and they tend to graze where food is most plentiful – often in agricultural areas and residential neighborhoods, where they cause damage to crops, landscaping, fencing and other private property.

Partly in response to rising concerns about property damage caused by the Humboldt and Del Norte herds, CDFW scientists are working on a wide-ranging, long-term study of Roosevelt elk population size and growth, herd movements, habitat use, disease and causes of mortality. The project, which is a collaborative effort with researchers from Humboldt State University, will collect critical baseline information about the animals that will help CDFW develop more robust and efficient methods for monitoring the herds, set future hunt quotas, inform local agencies about elk management and manage depredation issues. CDFW initiated this project in 2016 and expects to continue data collection efforts through 2018.

Tracking and studying one of the largest mammals in California is a much more complex undertaking than one might think. Roosevelt elk herds are wide-ranging and tend to graze in areas that are not easily accessible. Traditionally, CDFW relied on aerial surveys to monitor population trends of big game species such as elk, but such surveys are only feasible in a small portion of northwestern California because visibility is limited by steep terrain and dense vegetation. Ground surveys have similar constraints and are further limited by the small amount of occupied habitat that can be easily accessed from roads.

Given these constraints, CDFW scientists are employing multiple survey methodologies for the current study. Different techniques will be used in different habitat types. For example, in hard-to-reach areas, trail camera footage will be compared to visual surveys and used to collect herd composition data and estimate population size. Estimates will also be derived from analyzing the DNA contained in elk droppings.

CDFW also monitors the movement of the Roosevelt elk via electronic collars. There are currently 20 collared elk in coastal Del Norte and northern Humboldt counties and researchers hope to extend this project into central Humboldt County this winter, with plans to collar as many as 30 additional elk. Captured animals are also marked with ear tags, which allow for individual identification.

These survey efforts, and similar efforts elsewhere in the North Coast Roosevelt Elk Management Unit (EMU), are outlined in California’s Draft Elk Conservation and Management Plan, which is available for public review and comment through Monday, January 29. The plan provides guidance and direction to help set priorities for elk management efforts statewide.

CDFW photo: Environmental Scientist Carrington Hilson monitors a Roosevelt elk during a survey of the population.

Lassics lupine grows under protective cages.


Richard Macedo, Habitat Conservation Planning Branch Chief constructs a cage to protect rare, endangered Lassics lupine.


Lassics lupine grows under protective cages.

Biologists from three government natural resource agencies banded together this summer in an unusual effort to help preserve a species under threat of extinction. They lugged materials to build wire cages into the rough terrain of the remote Lassics mountains near the border of Humboldt and Trinity counties in an effort to protect their target. However, these cages were not built to trap animals; they were constructed to keep animals out.

The barren, green serpentine slopes of Mount Lassic, located in a seldom-visited part of Six Rivers National Forest, are home to one of California’s rarest plants: the Lassics lupine (Lupinus constancei). Lassics lupine is a short plant in the pea family that has bright rose-pink flowers. Only approximately 450 adult Lassics lupine plants were observed during 2017 monitoring of the species conducted by the U.S. Forest Service and the U.S. Fish and Wildlife Service, with assistance from CDFW.

Rodents such as deer mice, squirrels and chipmunks have been eating so many Lassics lupine seeds from the plants that, absent intervention, the species appears to be on the path to extinction within the next 50 years (Kurkjian et al. 2016).

Biologists believe that historical suppression of fires in Six Rivers National Forest beginning in the early 1900s may be indirectly responsible for the encroachment of forest and chaparral into Lassics lupine habitat. Fires that were put out quickly did not grow large enough to reduce encroaching forest, and therefore the forest expanded. With the encroaching vegetation came more seed-eating rodents that depend on vegetation cover for protection from predators.

In 2003, the U.S. Forest Service, U.S. Fish and Wildlife Service and other researchers began an emergency attempt to halt Lassics lupine’s trend towards extinction. Each summer, biologists set off on the laborious hike up Mount Lassic to place cylindrical wire cages over as many flowering Lassics lupine plants as possible. Each cage is anchored to the ground to prevent rodents from squeezing underneath.

The cages are remarkably effective at stopping rodents when properly installed, and they remain on the plants for the duration of the growing season. After Lassics lupine fruits have matured, they often split open suddenly and send seeds flying through the air up to 13 feet away. The cages are then removed each year before the onset of winter snow.

“Protecting endangered species is California’s policy and plants like the Lassics lupine could disappear within our lifetimes,” explained Jeb Bjerke, a biologist with CDFW’s Native Plant Program. “We should do what we can to save these unique plants for the future.”

In 2015, in the midst of an historic drought, an 18,200-acre fire spread through the Lassics, killing many Lassics lupine plants and charring the chaparral vegetation nearby. The fire had little effect on the forest that encroaches into Lassics lupine habitat, but preliminary studies suggest that the fire may have reduced rodent density in the burned chaparral. Despite the apparent reduction in rodent density following the fire, the impact from rodents eating Lassics lupine seeds remains high. Continued caging of Lassics lupine plants therefore remains critical for preventing extinction of the species until a more permanent solution can be implemented, such as significant reduction of encroaching forest. However, such efforts are expensive to plan and implement. As the primary land manager, the U.S. Forest Service would likely be the lead agency in future protective actions.

In 2016, the California Fish and Game Commission received a petition to list Lassics lupine as an endangered species under the California Endangered Species Act and the species was designated a candidate species earlier this year. CDFW is in the process of producing a status review for Lassics lupine that will include a recommendation to the California Fish and Game Commission on whether listing the species is warranted. The legislature directs all state agencies, including CDFW, to seek the conservation of endangered and threatened species.

“I hope that CDFW can continue to partner with the U.S. Forest Service and U.S. Fish and Wildlife Service to protect the Lassics lupine from extinction,” Bjerke said.

For additional information on this subject, please see:

• Report to the Fish and Game Commission, Evaluation of the Petition from Mr. David Imper and Ms. Cynthia Elkins to List the Lassics Lupine (Lupinus constancei) as an Endangered Species under the California Endangered Species Act (PDF).
• Kurkjian, H.M., S.K. Carothers, and E.S. Jules. 2016. Seed predation has the potential to drive a rare plant to extinction. Journal of Applied Ecology 54:862–871.

California Department of Fish and Wildlife photos by Jeb Bjerke

CDFW Seasonal Aid Katie Schroyer determines the age of a dove by examining its wing


A banded mourning dove at a CDFW trap site in northern California


Age and sex data are recorded before the bird is banded and released.


A large kennel trap can catch more than 30 birds at a time.

As the second half of California’s split dove season kicks off, dove hunters may put more than birds in their bags. They may harvest a bird with a band on its right leg – thus getting an opportunity to contribute important data that will help guide future management efforts.

Since 2003, California has been an active partner in a nationwide assessment of mourning dove populations. California is one of 39 states that currently participate in dove banding. During the months of July and August, trained biologists and volunteers trap and band doves throughout the state. The banding of migratory birds requires a Master Banding Permit issued upon approval of a study application by the U.S. Geological Survey. All banders must pass an annual training to participate and are then issued a sub-permit.

Mourning doves are so widely distributed that banding operations can be – and are – located almost anywhere, from rural locations to urban backyards. Larger operations located on Wildlife Areas, ranches and open desert sites may employ the use of a large kennel trap capable of trapping 30 or more birds at a time, while smaller operations (“backyard banders”) use small Kniffin traps that catch just one or two birds at a time.

When a bird is banded, age and sex data are recorded. This information, along with capture location, date, bander name and corresponding band number, becomes part of a massive database managed by the USGS’s Bird Banding Laboratory. The mourning dove banding data is available to any interested party, but is mainly used by the U.S. Fish and Wildlife Service (PDF), university scientists and state agency scientists to analyze and estimate annual survival, harvest rates, recruitment and abundance.

The resulting analysis is used by wildlife managers in setting annual hunting regulations. For instance, in 2015, the USFWS increased the take of mourning doves in the Western Management Unit (which includes the states of California, Oregon, Washington, Idaho, Nevada, Utah and Arizona) from a daily bag limit of 10 to 15. The California Fish and Game Commission followed suit, also increasing the possession limit from two to three times the daily bag limit, in order to accommodate hunters on multi-day hunting trips.

If you harvest or find (encounter) a banded bird, CDFW asks that you report the number directly to the Bird Banding Laboratory. This can be done online at www.reportband.gov, or by calling (800)327-2263. When reporting an encounter you will be asked for the band number and basic information about where and how you obtained the band.

The person reporting is allowed to keep the band, and will receive a certificate with the details about where, when and by whom the bird was banded.

The USGS Bird Banding Lab is the keeper of banding data for both the US and Mexico. As of September 18, 2017 and since 1960, the BBL has received over 64 million banding records. Since the inception of the North American Bird Banding Program, the BBL has received over 4 million encounter records. On average, over the past decade, the BBL received 1.2 million banding and 87,000 encounter records per year.

For more information about mourning dove banding, including the 2017 Mourning Dove Harvest Strategy, visit the Doves and Pigeons page on the FWS website.

CDFW photos by Kloey Helms
Featured photo: CDFW Seasonal Aid Katie Schroyer determines the age of a dove by examining its wing.

Fate has not been kind to the San Joaquin kit fox (Vulpes macrotis mutica).

Shrinking habitat caused by urbanization and agricultural expansion landed this Central Valley native on the federal Endangered Species List decades ago. California’s total population of San Joaquin kit foxes may now be down to a few thousand animals. To make matters worse, its favorite food, the kangaroo rat, is likewise endangered as the desert habitat it prefers continues to disappear.

Wildlife biologists took heart, however, in a population that seemed to be thriving within the city limits of Bakersfield. Unlike San Joaquin kit fox populations in other parts of the Central Valley range, the Bakersfield foxes adapted quite nicely to urban life. Their number – estimated between 200 and 400 animals – has evidently seemed to be holding steady and possibly increasing.

Their cute and cuddly appearance make them popular with city residents. Earlier research showed the population was healthy and genetically robust. Wildlife biologists were counting on those urban foxes to ensure the species’ survival should kit fox populations completely collapse elsewhere.

Today, those Bakersfield kit foxes are under siege, suffering from an outbreak of highly infectious sarcoptic mange. Mange – a skin condition caused by parasitic mites -- leads to hair loss, open wounds from scratching and, ultimately, death. The first case was detected among the kit fox population in March 2013, and since then, more than 200 cases have been documented. The epidemic has grown worse every year.

Given the importance of the Bakersfield population, CDFW, the U.S. Fish and Wildlife Service, the California State University, Stanislaus, the University of California, Davis (UCD), and various nonprofit wildlife groups have all joined forces to combat the mange.

Jaime Rudd, an environmental scientist in CDFW’s Wildlife Investigations Lab in Sacramento, is leading CDFW’s efforts while simultaneously writing her UCD Ph.D. dissertation on the outbreak. Rudd is researching ways to prevent mange from spreading to healthy animals, and assisting Stanislaus State’s Endangered Species Recovery Program with trapping and treating diseased foxes.

Severely diseased kit foxes are trapped and transported to the California Living Museum, a Bakersfield wildlife rehabilitation facility and zoo. There, the kit foxes are hospitalized, given life-saving antibiotics and fluids and treated with a topical pet product that kills the mites. The foxes often need months of treatment before they are healthy enough to release. And although the intervention saves individual lives, the process is costly and time-consuming – and doesn’t prevent the treated fox from getting mange a second or third time.

Rudd is making good use of her undergraduate degree in molecular biology, analyzing the DNA of the mites to see if they might be related to those in dogs and coyotes, which could be spreading the mange to the foxes.

“Essentially, we want to look at their molecular signature to see if these mites are related,” Rudd said.

Rudd is studying a group of wild kit foxes living on the CSU Bakersfield campus, which no doubt are supplementing their diet with burger bits and pizza crusts discarded by college students. Rudd is monitoring the group with trail cameras, outfitting some foxes with radio tracking collars and others with the type of preventative flea and tick collar you might use on a pet dog or cat.

“We want to evaluate the efficacy of these collars,” she said. “If they’re only going to work for two months, the collars won’t help us slow down the spread of mange, so is it really worth the effort of putting them on? But if they’re going to work for five months or more, then it might be worth the effort.”

If there is any hope sustaining Rudd and her colleagues in this important, though often disheartening, work, it’s this: “The fact we are not seeing mange in the outlying populations is cause for optimism,” she said. “If nothing else, we can at least try to keep it from leaving the city.”